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Re: Slow query on very large table
Posted by: Rick James
Date: May 28, 2008 09:34AM

Thank you, thank you for doing SHOW CREATE TABLE.

To fix that _one_ query,
ALTER TABLE ADD INDEX (chrom, Affy_ID);
Then it can be done "using index".

Suggest investigate creating and maintaining summary tables. One should try to avoid accessing summary info from tables this big. Also, maintaining indexes (eg, on INSERT/UPDATE) on this table may lead to disk thrashing.

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